Subject: Blood
Today's DistList is a special instance, devoted to a discussion stemming from Karen Pavelka's query in a previous DistList (if you want to review it, request 90-11-08.dst from the FileList). Most of the following discussion took place on two Usenet newsgroups sci.chem and sci.bio; the remainder happened in mail. It is reproduced here in a slightly edited form with the knowledge and permission of some but not all of the participants (I was unable to reach some). I have removed many of the usenet headers in the cause of creating bibliographic havoc for future generations and have cut a bit of side discussion referring to other discussion threads. The discussion kicked off with this query on sci.chem: A colleague at another library has asked what I think is a rather interesting question. Her institution has a manuscript that was ostensibly signed in blood in the 17th century and we are trying to think of a way to verify whether this is the case. Does anyone know of a test that would identify blood (or its components) that a) requires only microsamples? b) might work on a sample that is 300 years old? Any suggestion, or pointers to literature would be most welcome. I do recall something of the sort in a rather noxious popular book on the Shroud of Turin and will try to find that, and I dare say the Forensic literature is rife with such matters, but alas I don't have much access to such arcana. Thanks, Walter Henry Assistant Conservator Stanford University Libraries Date: 7 Nov 90 From: Walter Henry <whenry [at] lindy__stanford__edu> To: pavelka [at] utxvm__cc__utexas__edu Subject: blood ... Somewhere at work I have a pointer to a hemoglobin test that requires micro- samples (it was used on the shroud). I also have a painting on paper done with blood, that is about 10 years old. I will try to find it and see if I can tell you anything (it had a few years of (moderate) light exposure during the first few years after its creation, and dark storage since. onward, w **** Moderator's comments: The shroud book is Heller (See bibliography below). On revisiting it today, I'm inclined to soften the "noxious" rating; it's a pleasant enough book if you can get past the author's compulsion to jazz up the story. The discussion on blood are really not bad so bad and some exerpts are included below. Date: 10 Nov 90 From: Tom Bryce <tjbryce [at] amherst__bitnet> ... You might consider testing the wavelength at which the "blood" absorbs light. Hemoglobin absorbs light at very specific frequencies, which would be a useful fingerprint to tell the "blood" apart from ink. I believe this is what was done in the book you refer to. Also the off-broadway play "Into the Light". TJBRYCE@AMHERST ... Article 1172 of sci.chem: From: Ed Greenwood <greenwoode [at] merrimack__edu> Date: 11 Nov 90 ... You might do best to analyze a microsample with some sort of precipitin assay for RBC surface Ag. You could test for both A and B antigen in the hope that the "donor" wasn't type O! Just an enthusiastic idea from an undergrad. Let me know what you think. Good luck, Bob Leyland (future underpaid biologist) Article 1179 of sci.chem: Date: 12 Nov 90 Organization: Chemistry, Carnegie Mellon, Pittsburgh, PA C-14 dating using accelerator-based mass spectrometry should work. I believe there are some pioneers in this technique in CA. Sorry I don't have reference citations in hand. Paul J. Karol Carnegie Mellon Article 1193 of sci.chem: From: Mike Whitbeck <mikew [at] sanjuan__wrcr__unr__edu> Date: 13 Nov 90 Organization: DRI-WRC Reno I find this interesting! I have had casual inquiries from archaeologists about this. As far as I know the simple forensic tests (field tests) simply check for iron-- not terribly specific. The question that must be answered is 'Can blood proteins, in whole or sufficiently unique fragments survive over 300 years?' If the answer is yes then by all means talk to a biochemist about electrophoresis or chromatographic methods. If the answer is no then you need additional information about the use of iron in ink formulas of the day. Keep us posted! ______________________________. | mikew [at] wheeler__wrc__unr__edu | |__RENO___NEVADA_______________| Article 2451 of sci.chem: From: John G. DeArmond <jgd [at] rsiatl__UUCP> Date: 11 Nov 90 Organization: Radiation Systems, Inc. (a thinktank, motorcycle, car and gun works facility) ... You might want to look at X-ray Fluorescence Analysis which works by stimulating the unknown with X-rays and analysing the fluorescence that results. With the proper equipment and software, it is possible to "strip away" layers of thin film, such as on hard disk platters and make chemical analyses to 2 decimal point resolution. Low Z materials such as the constituents of paper do not show up and/or easily filtered. We just finished a project that involved building some portable instruments for the Smithsonian. You could contact them or I could put you in touch with my colleague who is a recognized expert in the field. John -- John De Armond, WD4OQC | "Purveyors of Performance Products Rapid Deployment System, Inc. | to the Trade " (tm) Marietta, Ga | {emory,uunet}!rsiatl!jgd | "Vote early, Vote often" Article 1276 of sci.chem: From: Larry Lippman <larry [at] kitty__UUCP> Summary: Limitations of x-ray fluorescence Date: 24 Nov 90 Organization: Recognition Research Corp., Clarence, NY In article <...>, jgd [at] rsiatl__UUCP (John G. DeArmond) writes: > >> ... > > You might want to look at X-ray Fluorescence Analysis which works by > ... XRF (x-ray fluorescence) is a technique used for elemental analysis above a Z (atomic number) of 8 or so. Therefore, it cannot readily detect the common elemental constituents of organic materials such as carbon, hydrogen, oxygen and nitrogen. Special XRF apparatus using a vacuum chamber has been able to detect elements with a Z as low as 5 (boron), but this is not a particularly sensitive, convenient or reliable technique. While it is obvious that the heme molecule contains iron, XRF cannot readily discriminate between heme and say, an ink containing just iron oxide (like red ocher). While XRF may be able to affirmatively identify certain inks with compositions comprising multiple elements above atomic number 8, it cannot affirm or deny the presence of blood with any reasonable degree of certainty. A good example of XRF for ink identification is the inks used to print currency, which have far more elements that one might imagine; a typical dollar bill contains: titanium, barium, lead, chromium, iron, cobalt, zinc and tungsten! XRF is quite useful for identification and authentication of many inks and pigments in documents, paintings, and other archaeological objects. But it just won't do blood. Now that we have dispensed with XRF, there *is* another x-ray method which can affirmatively identify blood - but it's not very easy. XRD (x-ray diffraction) can identify the specific structure of the heme molecule, and was in fact used by John Kendrew during the 1950's to discover the precise structure of hemoglobin. However, sample preparation for XRD requires some destruction of the article under investigation. In addition, it is necessary to separate the ink (or blood) from the paper and any other materials to minimize the number of unknowns. XRD can usually deal with binary mixtures, but beyond that it become extremely complex, if not impossible. The sample, possibly mixed with a binder, is placed in a capillary tube or molded, and then inserted within the XRD camera. While XRD may be used to affirmatively identify heme, it is not a simple process. Some considerable computer-aided analysis of XRD patterns is required. The complete structure of hemoglobin results in XRD patterns with over 25,000 reflections! >We just finished a project that involved building some portable >instruments for the Smithsonian. Interesting. I know some people at both the Freer Gallery and the Museum Support Center in Suitland, MD. I'll have to ask them about your project. Larry Lippman Recognition Research Corp. VOICE: 716/688-1231 FAX: 716/741-9635 Article 1277 of sci.chem: From: Larry Lippman <<larry [at] kitty__UUCP> Summary: ARCHAEOLOGICAL dating by amino acid racemization measurement Date: 24 Nov 90 Organization: Recognition Research Corp., Clarence, NY In article <...>, mikew [at] sanjuan__wrcr__unr__edu (Mike Whitbeck) writes: >I find this interesting! I have had casual inquiries from >ARCHAEOLOGISTS about this. As far as I know the simple forensic tests >(field tests) simply check for iron-- not terribly specific. Not iron, really, but many of the simple tests involve peroxidase reactions of hemoglobin (as I have described in a recent article). The only test which particularly reacts to iron is luminol - this test is seldom used anymore due to its propensity for interference from other metallic sources. >The question that must be answered is 'Can blood proteins, in whole or >sufficiently unique fragments survive over 300 years?' Sure! In fact, organic materials can often be dated by measurement of the extent of racemization of certain amino acids in its constituent proteins. An example of such a racemization reaction having a half-life of approximately 100,000 years is: L-isoleucine <--> D-alloisoleucine. Another racemization mechanism is L-aspartic acid <--> D-aspartic acid, which has a half-life of approximately 17,500 years. So, clearly if we can date proteins to 100,000 or more years, we can certainly take other measurements using 300-year old blood. > If the answer is yes then by all means talk to a > biochemist about electrophoresis or chromatographic methods. Unfortunately, there are some limitations. While we can identify certain proteins and such substances as hemoglobin (heme, actually), many of the characteristic enzymes, antigens and globulins in blood are long destroyed by age. However, sufficient fragments exist such that amino acids and other components may still be identified. Larry Lippman Recognition Research Corp. VOICE: 716/688-1231 FAX: 716/741-9635 Article 1291 of sci.chem: From: Larry Lippman <larry [at] kitty__UUCP> Summary: Identification of blood stains Date: 24 Nov 90 Organization: Recognition Research Corp., Clarence, NY In article <...>, tjbryce [at] amherst__bitnet writes: > > ... > You might consider testing the wavelength at which the "blood" absorbs > light. Hemoglobin absorbs light at very specific frequencies, which would > be a useful fingerprint to tell the "blood" apart from ink. I agree with the above advice. A microspectrophotomet is an instrument which couples a traditional scanning UV/VIS/NIR spectrophotometer to a microscope, and can facilitate both transmissive and reflective measurements. In a viewing mode the microscope eyepiece is used to position the instrument to the desired location on the sample, at which point a movable mirror is operated to connect the spectrophotometer in place of the eyepiece. Since one must use a more complex optical path through a microscope, the wavelength of a microspectrophotomet is limited to not much more than 1100 nm at the high end, and not much less than 300 nm at the low end. Zeiss makes a series of microscopes called "Zonax" which offer scanning @spectrophotometric capabilities. A computer with color monitor is used to process and display various types of spectrophotometric data representations. My organization had a Zeiss Zonax system for almost two years as GFE; unfortunately, we had to return it at the conclusion of the contract. :-) This particular model was really slick, although its spectral range was limited to 400 to 700 nm. Newer models have greater spectral range. Zeiss Zonax systems are rather pricey, however; the model we had sold for around $ 60 K. Getting back to the specific issue of blood, hemoglobin has two very specific absorption bands at 540 and 578 nm, with a minimum absorption at 560 nm. Not only can such spectrophotometric data be used for determination of the presence of blood, but work by Kind, Patterson et al has developed methodology for the spectrophotometric *dating* of blood. In this case, a small amount of a bloodstain is dissolved in a dilute solution of ammonium hydroxide, and a complete spectrophotometric scan is made. Analysis of the spectrophotometric curve is used to arrive at an approximate age of the bloodstain. Further details on this process is in the literature. In the particular case of authenticating the document in question, I would suggest that a spectrophotometric determination be made along with at least one *other* test. The following are general suggestions for such an additional test (explicit test details are readily found in the literature and in textbooks on forensic science). Sampling for these tests can be relatively non-destructive through scraping of a small sample of suspected blood, or through the use of moistened filter paper to absorb a sample of the suspected blood. 1. Methylated benzidine test, which can detect blood in concentrations as low as 10 ppm. 2. Kastle-Meyer phenolphthalein test, which while less sensitive than the methylated benzidine test, is surprisingly immune to interference (except for a few fruit and vegetable materials). 3. Takayama hemochromogen test, which uses pyridine to cause the reduction of hemoglobin, resulting in characteristic salmon-pink crystals of pyridine hemoglobin observable under the microscope. Unfortunately, at this point, even if we achieve affirmative results from the above tests, we are faced with another problem: is the blood *human*? With blood stains that are less than a few months old, this is not usually a problem, and various procedures exist for such determinations. A common test uses what is called anti-human precipitating antiserum. There is, however, a common interference problem with such precipitin tests resulting from tannin in wood, paper and leather. This may or may not be a problem with the document in question. The use of anti-serum tagged with fluorescent dye, and the making of observations under a microscope with UV illumination may aid in precipitin testing. Another problem, though, is that anti-human serum will not differentiate between human and primate blood - however, I would probably not lose any sleep over this remote possibility. :-) There is a gel electrophoresis procedure whereby the albumin and non-gamma globulins of the samples are made to migrate toward the gamma globulins of the selected anti-sera (usually a selection of anti-human, anti-cow, anti-pig, anti-dog, etc.). Positive results are indicated by a precipitation line. Unfortunately, it is highly doubtful that 300-year old blood stains can be species-identified (let alone ABO-typed) by *any* method. Many antigens, such as M and N factors are destroyed within several weeks. Various isoenzymes and serum proteins (like Hp, AK, PGM, EAP, etc.) are also destroyed within a few months. I have, however, heard it claimed that if blood dries quickly and *remains* dry, the A and B antigens will remain stable almost indefinitely. The oldest antigen identification that I have heard of occurred in the U.K. after a period of ten years. This specimen actually contained a dried crust of blood, as opposed to a stain - so the greater quantity may have been a factor. While I feel confident that 300-year old blood can be reliably identified *as blood*, I am highly doubtful that any species identification can be made. I don't know if that is sufficient authentication for the document in question. Larry Lippman Article 1292 of sci.chem: From: Roy Smith <roy [at] phri__nyu__edu> Date: 25 Nov 90 Organization: Public Health Research Institute, New York City larry [at] kitty__UUCP (Larry Lippman) writes: > I feel confident that 300-year old blood can be reliably identified > *as blood*, I am highly doubtful that any species identification can > be made. Would it be possible to recover enough DNA to do PCR on it? I seem to remember reading something about doing PCR on DNA from a frozen quagga (a zebra-like beast which became extinct in the last ice age, now only found on "rogue" games). The quagga DNA was O(10,000) years old, which is considerably older than 300 years, but perhaps freezing is a better method of preserving than drying on paper? Assuming you could do PCR, how hard would it be to determine the species? The most likely other candidates would probably be some sort of food animal, such as cow, pig, or chicken (or whatever animals they were eating 300 years ago; the point is, other primates would be unlikely). Actually, it just occurred to me that red blood cells don't have DNA, if I remember correctly, but maybe some other component of blood does? ... -- Roy Smith, Public Health Research Institute 455 First Avenue, New York, NY 10016 roy [at] alanine__phri__nyu__edu -OR- {att,cmcl2,rutgers,hombre}!phri!roy "Arcane? Did you say arcane? It wouldn't be Unix if it wasn't arcane!" Article 1295 of sci.chem: From: Jeff Forbes <forbes [at] aries__scs__uiuc__edu> Date: 25 Nov 90 Organization: School of Chemical Sciences, Univ. of Illinois at Urbana-Champaign In article <...> roy [at] phri__nyu__edu (Roy Smith) writes: >Actually, it just occurred to me that red blood cells don't have DNA, >if I remember correctly, but maybe some other component of blood does? You are correct. Mammalian erythrocytes do not have a nucleus and therefore no DNA. Other cellular components of blood do have a nucleus, but the concentration is much less than the erythrocytes. Avian erythrocytes do have a nucleus. Jeff Forbes "....I have not failed. I've just found 10,000 ways that won't work." Thomas Edison Article 1298 of sci.chem: From: Andrew Taylor <andrewt [at] cs__su__oz> Date: 25 Nov 90 Reply-To: andrewt [at] cluster__cs__su__oz (Andrew Taylor) Organization: Basser Dept of Computer Science University of Sydney, Australia ... Quaggas became extinct about 100 years ago (in Southern Africa). Maybe you have the wrong animal? Article 1300 of sci.chem: From: Mike Whitbeck <mikew [at] sanjuan__wrcr__unr__edu> Date: 26 Nov 90 Reply-To: mikew [at] sanjuan__UUCP (Mike Whitbeck) Organization: DRI-WRC Reno I recently read an article in the newspaper that some archaeologists were using serum antigens to ID very old blood with species identification. ______________________________. | mikew [at] wheeler__wrc__unr__edu | |__RENO___NEVADA_______________| Article 1302 of sci.chem: From: Larry Lippman <larry [at] kitty__UUCP> Summary: Unlikelihood of DNA sequencing from old, dried blood Date: 26 Nov 90 Organization: Recognition Research Corp., Clarence, NY In article <...>, roy [at] phri__nyu__edu (Roy Smith) writes: > larry [at] kitty__UUCP (Larry Lippman) writes: > > ... > Would it be possible to recover enough DNA to do PCR on it? I don't believe that any DNA fragments would exist in the dry condition of a 300-year old blood stain, notwithstanding the fact that mature mammalian erythrocytes don't have a nucleus, mitochondria, ribosomes, etc. Leucocytes are a true cell with a nucleus and DNA, but I rather doubt that any would be found in a 300-year old blood stain. I can't offer any authoritative comments on DNA issues, though. I don't do DNA, genetic mapping or any aspect of molecular biology. I have enough trouble maintaining competency in selected more traditional aspects of chemistry and biochemistry! :-) > Actually, it just occurred to me that red blood cells don't have DNA, >if I remember correctly, but maybe some other component of blood does? As far as I can recall, no *mature* mammalian erythrocytes possess DNA. Erythrocytes of birds, reptiles, etc. do have a nucleus with DNA and all the trimmings, though. ... Larry Lippman Article 1309 of sci.chem: From: Henling, Lawrence M. <lmh [at] iago__caltech__edu> Subject: Re: Blood, money (not pieces of silver...) Summary: Limitations of x-ray fluorescence Date: 27 Nov 90 Organization: California Institute of Technology In article <...>, larry [at] kitty__UUCP (Larry Lippman) writes... >... >A good example of XRF for ink identification is the inks used to print >currency, which have far more elements that one might imagine; a >typical dollar bill contains: titanium, barium, lead, chromium, iron, >cobalt, zinc and tungsten! And that's why shredded worn-out paper money is treated as toxic waste. larry henling lmh [at] iago__caltech__edu Article 1310 of sci.chem: From: Eric E. Snyder <eesnyder [at] boulder__Colorado__EDU> Date: 27 Nov 90 Organization: University of Colorado, Boulder In article <...> larry [at] kitty__UUCP (Larry Lippman) writes: >In article <...>, roy [at] phri__nyu__edu (Roy Smith) writes: >> Would it be possible to recover enough DNA to do PCR on it? > I don't believe that any DNA fragments would exist in the dry >condition of a 300-year old blood stain..... I bet there would be PCRable DNA fragments.... Remember that DNA is a remarkably stable molecule (even in my hands). Furthermore, PCR only requires a few molecules of template to give a signal... that is not too much to ask. One could easily do species ID by selecting a highly polymorphic locus such as beta-casein and sequencing the amplified product. TTGATTGCTAAACACTGGGC Eric E. Snyder Department of MCD Biology We are not suspicious enough University of Colorado, Boulder of words, and calamity strikes. Boulder, Colorado 80309-0347 LeuIleAlaLysHisTrpAl Article 1328 of sci.chem: From: Keith Conover <ireland [at] ac__dal__ca> Date: 27 Nov 90 Organisation: Dalhousie University, Halifax, Nova Scotia, Canada In article <...>, andrewt [at] cs__su__oz (Andrew Taylor) writes: > In article <...> roy [at] phri__nyu__edu (Roy Smith) >>... >> to remember reading something about doing PCR on DNA from a frozen > quagga Quaggas became extinct about 100 years ago (in Southern > Africa). Maybe you have the wrong animal? If I remember correctly, two different experiments are being confused here. The quagga DNA came from a museum specimen, possibly a hide. The PCR done on DNA isolated from a beast which was frozen and extinct from the last ice age came from a wooly mammoth. Keith Conover Article 1337 of sci.chem: From: David Throop <throop [at] cs__utexas__edu> Date: 29 Nov 90 Organization: Dept of Computer Sciences, UTexas, Austin Walter Henry is trying to validate a claim that a particular document was signed in blood 300 yrs ago. Walter, can you be a little more specific? Are you trying to determine- - That the signature is really in blood? - That the signature is really in human blood? - That the signature is really in the human blood of the putative author? - That the signature is really 300 yrs old? - That the signature is really in the handwriting of the putative author? - That the signature in blood is legally binding for the sale of a human soul? Really, Walter, if you're going to have us help on this, you should at least tell us the good parts. What kind of a document gets signed in blood? Or did the guy's quill pen just happen to be dull that day? This has got to be juicy. I'll assume that you are trying to prove that the signature is really in blood, but that you'd be willing to risk being fooled by other mammalian blood, and that you'll fix the document's age by other means. The methods advanced so far [various x-ray methods to detect iron and PCA reactions on the DNA] seem inadequate - in particular, I doubt you'll get any kind of a reading of the x-ray because of gross contamination, and, as others have pointed out, you may well not get any DNA from blood. I'd suggest gas chromatography/mass spec. I remember articles circa 1979 about using GCMS to identify different bacterial strains - they'd culture the bacteria, take a couple of micrograms, inject the sample into a very hot chamber for flash pyrolysis, and then routed the pyrolysis products to the gc column, then ms. The pyrolysis signatures had enough detail (and were repeatable enough) that they could tell different strains of the same organism apart, but still identify a broad range of pathogens. And of course, GCMS is much more forgiving of contamination than other methods, because if you see the same GC peaks as the pure sample, and those peaks have the same MS signatures as the pure sample, you've got a positive no matter what other garbage comes out in the other peaks. And GCMS works with extremely small sample sizes. I'd think that this approach would certainly be good enough to pick out blood from non-blood, and probably human from non-human blood. But finally, I'd say check in with a forensic pathologist - crime lab folks. They work with identifying blood from contaminated samples all the time. They've probably got lots of techniques that us general chemistry types wouldn't know about. David Throop Article 1378 of sci.chem: From: Larry Lippman <larry [at] kitty__UUCP> Summary: Analytical methods employing pyrolysis with GCMS Date: 5 Dec 90 In article <...>, throop [at] cs__utexas__edu (David Throop) writes: > I'd suggest gas chromatography/mass spec. I remember articles circa > 1979 about using GCMS to identify different bacterial strains - they'd > culture the bacteria, take a couple of micrograms, inject the sample > into a very hot chamber for flash PYROLYSIS, and then routed the > PYROLYSIS products to the gc column, then ms. The PYROLYSIS > signatures had enough detail (and were repeatable enough) that they > could tell different strains of the same organism apart, but still > identify a broad range of pathogens. I do not believe that PYROLYSIS followed by GCMS will be of any use for identification of blood. PYROLYSIS has its place for the identification of functional groups through the creation of smaller molecules such as: CH4, C2H4, C2H6, CO, CO2, NH3, H2S, H2O, etc. The identification of blood is based upon the characteristics of a *structure* - hemoglobin. Don't forget that as a complex protein, hemoglobin has an m.w. of around 65,000. Mere functional group identification analysis (in this case not that much better than simple CHNO determination, for that matter) is not likely to create an a priore basis to differentiate hemoglobin from say, myoglobin, serum albumin, or other organic materials. PYROLYSIS followed by GCMS is a useful technique in forensic science, but not for identification of blood or other body fluids. PYROLYSIS followed by GCMS is useful for rapid toxicology screening (where one has *real* unknowns!), especially when such GCMS results are compared to standards by means of Kovats retention indices (much work has been done along such lines). > And of course, GCMS is much more forgiving of contamination than other > methods, because if you see the same GC peaks as the pure sample, and > those peaks have the same MS signatures as the pure sample, you've got > a positive no matter what other garbage comes out in the other peaks. > And GCMS works with extremely small sample sizes. The above is generally true. > I'd think that this approach would certainly be good enough to pick > out blood from non-blood, and probably human from non-human blood. If we had a *singular* unknown and compared a standard sample of blood to an unknown sample which bore no relation to blood (such as ink), I would agree. However, there are too many unknown factors due to the age of the document, its material and potential impurities (paper, parchment, coatings, etc.) to be confident of any such identification. With respect to differentiation of "human from non-human blood", I don't believe there is a prayer of a chance that such identification can be made using GCMS - provided that we are comparing human to other mammalian blood. PYROLYSIS followed by GCMS has an outstanding application: the identification of polymers, especially mixed polymers. Larry Lippman >From eesnyder [at] boulder__Colorado__EDU Fri Nov 30 19:13:48 1990 Date: 30 Nov 90 From: Eric E. Snyder <eesnyder [at] boulder__colorado__edu> Cc: eesnyder [at] boulder__Colorado__EDU ... It sounds like an interesting project. If you are really interested in finding out if it is human and are willing to purchase the necessary primers, I could actually test it out for you. It would probably cost about $200 unless I could find some one who has them. That is probably beyond your budget but it is a doable project. I run several PCR reactions a week, thus it wouldn't be a problem. Jane Doe *** Conservation DistList Instance 4:36 Distributed: Saturday, December 29, 1990 Message Id: cdl-4-36-001 ***Received on Wednesday, 19 December, 1990